Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB82391.1Metapyrocatechase 2; [E] COG0346 Lactoylglutathione lyase and related lyases. (332 aa)    
Predicted Functional Partners:
EEB82444.1
Monooxygenase, FAD-binding; [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
 
  
  0.841
RGAI101_2
5-carboxymethyl-2-hydroxymuconate delta-isomerase; [Q] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
     
 0.718
EEB84932.1
[I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
  0.655
EEB83201.1
[I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding).
     
  0.655
hpaD
3,4-dihydroxyphenylacetate 2,3-dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
 
  
 0.534
hpaH
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; [Q] COG3971 2-keto-4-pentenoate hydratase.
 
   
 0.512
EEB82423.1
Transcriptional regulator, LysR family; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.472
EEB82785.1
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
    
  0.438
EEB86421.1
4-hydroxyphenylpyruvate dioxygenase; [G] COG1082 Sugar phosphate isomerases/epimerases.
  
  
 0.431
RGAI101_6
Putative catechol 2,3-dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
  
  
 0.414
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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