STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB83195.1[E] COG4583 Sarcosine oxidase gamma subunit. (191 aa)    
Predicted Functional Partners:
EEB85603.1
Sarcosine oxidase, delta subunit, heterotetrameric; [E] COG4311 Sarcosine oxidase delta subunit.
 
 0.999
EEB84343.1
Sarcosine oxidase, alpha subunit family; [R] COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
 0.997
EEB84114.1
Sarcosine oxidase, alpha subunit family; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
 0.982
soxD_2
[E] COG4311 Sarcosine oxidase delta subunit.
 
 0.979
EEB86266.1
Glycine cleavage T-protein (aminomethyl transferase); [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 0.936
EEB86363.1
Sarcosine oxidase subunit beta; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  0.929
EEB84188.1
Glycine cleavage T-protein (aminomethyl transferase); [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 0.922
EEB83841.1
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
 
 0.921
EEB85254.1
Glycine cleavage T-protein (aminomethyl transferase); [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 0.914
EEB83026.1
Glycine cleavage T-protein (aminomethyl transferase); [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
  
 0.903
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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