Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB83220.1Protein-tyrosine kinase, putative; [D] COG0455 ATPases involved in chromosome partitioning. (716 aa)    
Predicted Functional Partners:
EEB86057.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
 
 0.988
EEB82534.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
 
 0.971
EEB85601.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
 
 0.961
EEB84925.1
Cold shock protein; [M] COG1596 Periplasmic protein involved in polysaccharide export.
  
 0.951
EEB85631.1
Polysaccharide biosynthesis/export protein; [M] COG0797 Lipoproteins.
  
 0.951
EEB83950.1
[M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.926
EEB84287.1
UDP-galactose-lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.909
EEB86302.1
Undecaprenyl-phosphate galactose phosphotransferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.909
EEB82551.1
UDP-galactose-lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.900
EEB85124.1
Glycosyl transferase, WecB/TagA/CpsF family; [M] COG1922 Teichoic acid biosynthesis proteins.
 
 
 0.887
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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