STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB82808.1Conserved hypothetical protein; [R] COG0645 Predicted kinase. (542 aa)    
Predicted Functional Partners:
EEB86450.1
Carboxymethylenebutenolidase; [Q] COG0412 Dienelactone hydrolase and related enzymes.
  
  
 0.730
EEB82642.1
Sensory box sensor histidine kinase/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
  
 0.723
EEB82928.1
Cation-transporting ATPase Pma1; [P] COG2217 Cation transport ATPase.
 
    0.719
EEB82537.1
Metallopeptidase, M50 family; [R] COG0517 FOG: CBS domain; Belongs to the peptidase M50B family.
 
  
 0.553
EEB82754.1
Heat shock protein Hsp20; [O] COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
 
     0.548
grpE_2
Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...]
       0.532
dpbF
[L] COG1796 DNA polymerase IV (family X).
       0.516
EEB82953.1
[O] COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
 
     0.512
EEB82733.1
Peptidoglycan-binding domain 1; [S] COG2989 Uncharacterized protein conserved in bacteria.
       0.506
EEB84417.1
Oxacillin resistance-associated protein fmtc; [S] COG2898 Uncharacterized conserved protein.
     
 0.498
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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