STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB82837.1Phosphoglycerate mutase family protein; [G] COG0406 Fructose-2,6-bisphosphatase. (215 aa)    
Predicted Functional Partners:
EEB82732.1
Phosphotransferase family protein; [R] COG3173 Predicted aminoglycoside phosphotransferase.
 
    0.883
acaB
[I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
    0.801
EEB82809.1
Rhamnolipids biosynthesis 3-oxoacyl-(acyl-carrier-protein) reductase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
   0.752
EEB82909.1
Peroxisomal multifunctional enzyme type 2; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.747
EEB82925.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
 
   0.743
EEB82863.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
 
   0.742
EEB82883.1
MaoC family protein; [I] COG2030 Acyl dehydratase.
 
     0.602
EEB85668.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.566
EEB82813.1
Oxidoreductase, zinc-binding dehydrogenase family; [R] COG1064 Zn-dependent alcohol dehydrogenases.
 
     0.564
EEB82782.1
NADP-dependent leukotriene b4 12-hydroxydehydrogenase; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
    0.542
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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