STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB83294.1Lipoprotein, putative. (172 aa)    
Predicted Functional Partners:
EEB83125.1
Conserved hypothetical protein.
  
     0.768
EEB83314.1
Conserved hypothetical protein.
  
     0.713
EEB83459.1
Conserved hypothetical protein.
  
     0.683
EEB85758.1
Hpt domain protein.
  
     0.666
EEB85266.1
Conserved hypothetical protein.
  
     0.665
EEB86343.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.665
EEB84574.1
[R] COG2166 SufE protein probably involved in Fe-S center assembly.
       0.664
EEB83185.1
Surface presentation of antigens protein.
  
     0.663
phaP
Phasin, PhaP; [M] COG3064 Membrane protein involved in colicin uptake.
  
     0.642
EEB86401.1
Conserved hypothetical protein.
  
     0.629
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.