STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB83303.1Two-component response regulator; [T] COG0784 FOG: CheY-like receiver. (269 aa)    
Predicted Functional Partners:
EEB84672.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; [T] COG2202 FOG: PAS/PAC domain.
  
 0.996
EEB82642.1
Sensory box sensor histidine kinase/response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.996
EEB86404.1
Sensory transduction regulatory protein; [T] COG0642 Signal transduction histidine kinase.
 
 0.994
EEB84779.1
Sigma-24; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.953
EEB84774.1
Signal transduction histidine kinase; [T] COG2770 FOG: HAMP domain.
 
  
 0.944
fixL
Sensor histidine kinase; [T] COG2202 FOG: PAS/PAC domain.
  
 0.935
EEB83055.1
Signal transduction histidine kinase; [T] COG2202 FOG: PAS/PAC domain.
 
 0.932
EEB86382.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
  
 0.932
EEB86464.1
[T] COG0642 Signal transduction histidine kinase.
  
 0.929
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
 0.926
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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