STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB83329.1[S] COG4850 Uncharacterized conserved protein. (340 aa)    
Predicted Functional Partners:
EEB86450.1
Carboxymethylenebutenolidase; [Q] COG0412 Dienelactone hydrolase and related enzymes.
    
   0.732
EEB84075.1
Twin-arginine translocation pathway signal; [S] COG2930 Uncharacterized conserved protein.
    
   0.721
carB
Carbamoyl-phosphate synthase, large subunit; [I] COG0439 Biotin carboxylase; Belongs to the CarB family.
       0.651
EEB86147.1
Conserved hypothetical protein, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.589
fabH_2
[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
       0.495
EEB84989.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.464
EEB82607.1
[M] COG0668 Small-conductance mechanosensitive channel.
  
     0.435
EEB83595.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.435
EEB84859.1
Esterase YbfF; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.400
EEB83644.1
Conserved hypothetical protein.
  
     0.400
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.