STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB83369.1Sugar ABC transporter, permease protein; [R] COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (314 aa)    
Predicted Functional Partners:
EEB84378.1
Inner-membrane translocator; [G] COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
EEB84189.1
ABC transporter component; [R] COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
 
 0.977
EEB85872.1
[R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
 0.972
EEB83704.1
Sugar ABC transporter, permease protein; [G] COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.936
EEB85344.1
Sugar ABC transporter, permease protein; [G] COG4214 ABC-type xylose transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.916
EEB83130.1
Sugar ABC transporter, permease protein; [E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.907
EEB85359.1
Sugar ABC transporter, ATP-binding protein; [R] COG3845 ABC-type uncharacterized transport systems, ATPase components.
 
 
 0.894
EEB85415.1
[F] COG1001 Adenine deaminase.
 
    0.891
EEB84954.1
Sugar ABC transporter, ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
 
 0.886
EEB83987.1
Basic membrane lipoprotein; [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
 
 
 0.885
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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