Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB83380.1Conserved hypothetical protein TIGR00370; [E] COG2049 Allophanate hydrolase subunit 1. (271 aa)    
Predicted Functional Partners:
EEB86324.1
[E] COG1984 Allophanate hydrolase subunit 2.
 0.999
EEB85832.1
[E] COG1984 Allophanate hydrolase subunit 2.
 0.998
uca
Urea carboxylase; [I] COG0511 Biotin carboxyl carrier protein.
 
0.997
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.984
EEB83707.1
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.964
EEB86303.1
Glutamate synthase domain family protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C.
   
 
  0.809
EEB84926.1
Transcriptional regulator, GntR family; [K] COG2186 Transcriptional regulators.
       0.773
EEB85568.1
N-carbamoyl-L-amino acid amidohydrolase; [E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.773
EEB85684.1
[CHR] COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.773
EEB86521.1
Transcriptional regulator, GntR family; [K] COG1802 Transcriptional regulators.
       0.773
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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