Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEB83437.1 | EEB83451.1 | RGAI101_586 | RGAI101_600 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | 0.991 |
| EEB83437.1 | EEB84643.1 | RGAI101_586 | RGAI101_1793 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | [C] COG2864 Cytochrome b subunit of formate dehydrogenase. | 0.994 |
| EEB83437.1 | EEB84730.1 | RGAI101_586 | RGAI101_1880 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 4Fe-4S binding domain protein; [C] COG1145 Ferredoxin. | 0.883 |
| EEB83437.1 | EEB85091.1 | RGAI101_586 | RGAI101_2241 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.881 |
| EEB83437.1 | EEB85693.1 | RGAI101_586 | RGAI101_2848 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Chaperone, TorD family, putative; [R] COG3381 Uncharacterized component of anaerobic dehydrogenases. | 0.893 |
| EEB83437.1 | EEB85875.1 | RGAI101_586 | RGAI101_3030 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase, beta subunit; [C] COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC. | 0.999 |
| EEB83437.1 | EEB86410.1 | RGAI101_586 | RGAI101_3567 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Iron-sulfur cluster-binding protein; [C] COG1145 Ferredoxin. | 0.957 |
| EEB83437.1 | boxA | RGAI101_586 | RGAI101_715 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | benzoyl-CoA oxygenase/reductase, BoxA protein; [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.980 |
| EEB83437.1 | nuoE_1 | RGAI101_586 | RGAI101_1750 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | NADH dehydrogenase i, e subunit; [S] COG3743 Uncharacterized conserved protein. | 0.948 |
| EEB83437.1 | nuoF | RGAI101_586 | RGAI101_1071 | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.987 |
| EEB83451.1 | EEB83437.1 | RGAI101_600 | RGAI101_586 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.991 |
| EEB83451.1 | EEB84643.1 | RGAI101_600 | RGAI101_1793 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | [C] COG2864 Cytochrome b subunit of formate dehydrogenase. | 0.998 |
| EEB83451.1 | EEB85091.1 | RGAI101_600 | RGAI101_2241 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.851 |
| EEB83451.1 | EEB85693.1 | RGAI101_600 | RGAI101_2848 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | Chaperone, TorD family, putative; [R] COG3381 Uncharacterized component of anaerobic dehydrogenases. | 0.877 |
| EEB83451.1 | EEB85875.1 | RGAI101_600 | RGAI101_3030 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | Formate dehydrogenase, beta subunit; [C] COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC. | 0.876 |
| EEB83451.1 | EEB86410.1 | RGAI101_600 | RGAI101_3567 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | Iron-sulfur cluster-binding protein; [C] COG1145 Ferredoxin. | 0.972 |
| EEB83451.1 | boxA | RGAI101_600 | RGAI101_715 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | benzoyl-CoA oxygenase/reductase, BoxA protein; [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. | 0.857 |
| EEB83451.1 | nuoE_1 | RGAI101_600 | RGAI101_1750 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | NADH dehydrogenase i, e subunit; [S] COG3743 Uncharacterized conserved protein. | 0.449 |
| EEB83451.1 | nuoF | RGAI101_600 | RGAI101_1071 | 4Fe-4S ferredoxin, iron-sulfur binding; [C] COG1146 Ferredoxin. | NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.708 |
| EEB84643.1 | EEB83437.1 | RGAI101_1793 | RGAI101_586 | [C] COG2864 Cytochrome b subunit of formate dehydrogenase. | Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.994 |
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