Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB83503.1[I] COG1960 Acyl-CoA dehydrogenases. (392 aa)    
Predicted Functional Partners:
EEB84818.1
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.877
EEB82949.1
Peroxisomal bifunctional enzyme; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.861
EEB85087.1
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.833
EEB84445.1
Peroxisomal bifunctional enzyme; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.828
EEB86184.1
3-hydroxyacyl-CoA dehydrogenase, NAD-binding; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.828
EEB85064.1
Conserved hypothetical protein; [IQ] COG0236 Acyl carrier protein.
       0.773
etfB
[C] COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.771
EEB84137.1
Fatty acid-CoA ligase; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
  0.759
EEB84515.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.712
bhbD
[I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
  0.683
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
Server load: medium (64%) [HD]