Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB83534.1Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits. (712 aa)    
Predicted Functional Partners:
EEB84099.1
[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
 
 0.983
EEB85875.1
Formate dehydrogenase, beta subunit; [C] COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC.
   
 0.952
EEB85328.1
Cyclase family protein; [R] COG1878 Predicted metal-dependent hydrolase.
 
     0.940
EEB84206.1
Transcriptional regulator, MarR family; [K] COG1846 Transcriptional regulators.
 
     0.938
sat
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
 
 0.870
fadH
2,4-dienoyl-CoA reductase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
   
 0.830
nuoE_1
NADH dehydrogenase i, e subunit; [S] COG3743 Uncharacterized conserved protein.
   
 0.825
EEB86303.1
Glutamate synthase domain family protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C.
     
 0.802
EEB86410.1
Iron-sulfur cluster-binding protein; [C] COG1145 Ferredoxin.
  
 
 0.795
EEB83788.1
Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.786
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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