Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RGAI101_8ABC transporter, ATP-binding protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. (72 aa)    
Predicted Functional Partners:
EEB84193.1
[E] COG1174 ABC-type proline/glycine betaine transport systems, permease component.
 
 0.938
EEB83990.1
Sulfonate ABC transporter, periplamic sulfonate-binding protein; [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.911
EEB82456.1
Sulfonate ABC transporter, periplamic sulfonate-binding protein; [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.911
nasE
[E] COG4176 ABC-type proline/glycine betaine transport system, permease component.
  
  0.745
EEB82897.1
ABC transporter, periplasmic substrate-binding protein; [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 0.723
EEB83788.1
Molybdopterin oxidoreductase Fe4S4 domain family protein; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.716
EEB82905.1
[E] COG1174 ABC-type proline/glycine betaine transport systems, permease component.
  
  0.692
EEB83809.1
[E] COG1174 ABC-type proline/glycine betaine transport systems, permease component.
  
  0.692
nasF
Nitrate transporter substrate-binding; [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 0.687
nasS
[P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
 0.687
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.