Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
repA_2Plasmid partitioning protein RepA; [D] COG1192 ATPases involved in chromosome partitioning. (422 aa)    
Predicted Functional Partners:
repB
Plasmid partitioning protein RepB; [K] COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 
 0.974
EEB82442.1
Replication protein C; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
   
 0.873
EEB82676.1
Hypothetical protein; [K] COG1475 Predicted transcriptional regulators; rb102.
 
 
 0.851
EEB82861.1
Conserved hypothetical protein.
 
 
 0.797
parB
Chromosome partitioning protein; [K] COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
 
 
 0.696
EEB82542.1
ParA family ATPase.
  
     0.648
EEB83885.1
N-acetylglucosaminyltransferase; [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
 
 0.500
EEB82629.1
[M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
 
 0.500
EEB84892.1
Yggt family protein; [S] COG0762 Predicted integral membrane protein.
  
    0.455
EEB84672.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; [T] COG2202 FOG: PAS/PAC domain.
  
  
 0.429
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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