STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEB83834.1Glycosyltransferase, group 1; [M] COG0438 Glycosyltransferase. (358 aa)    
Predicted Functional Partners:
EEB86422.1
Conserved hypothetical protein; [R] COG4671 Predicted glycosyl transferase.
 
     0.961
redA
Membrane-anchored protein; [R] COG4671 Predicted glycosyl transferase.
 
     0.960
EEB83231.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.954
EEB83541.1
[G] COG0588 Phosphoglycerate mutase 1.
 
     0.938
EEB83337.1
Mechanosensitive ion channel family protein; [M] COG0668 Small-conductance mechanosensitive channel.
 
     0.871
EEB85959.1
UDP-glucose/GDP-mannose dehydrogenase family protein; [M] COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.826
EEB85669.1
Cyclic nucleotide-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
 
 0.782
EEB84794.1
ABC transporter, permease protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
   
 0.774
EEB85180.1
Extracellular solute-binding protein, family 5; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
  
     0.773
EEB85522.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.770
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.