Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EEB83843.1Transglycosylase SLT domain protein; [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (219 aa)    
Predicted Functional Partners:
EEB83219.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
     
 0.667
EEB83851.1
Flagellar motor protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.511
amiC_1
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
 
  
 0.484
EEB82706.1
Type IV / VI secretion system protein, DotU family; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
  
 0.471
EEB85104.1
OmpA family domain protein; [N] COG1360 Flagellar motor protein.
  
     0.468
fliG
[N] COG1536 Flagellar motor switch protein.
 
    0.426
EEB86101.1
Transglycosylase, Slt family; [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
   
 0.413
EEB84962.1
OmpA family domain protein; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.406
Your Current Organism:
Roseobacter sp. GAI101
NCBI taxonomy Id: 391589
Other names: R. sp. GAI101
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