STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wtpAHypothetical protein; COG0725 ABC-type molybdate transport system, periplasmic component. (305 aa)    
Predicted Functional Partners:
EDM24555.1
Sulfate/molybdate ABC transporter, permease protein; COG0555 ABC-type sulfate transport system, permease component.
 
 0.997
EDM24554.1
Sulfate/molybdate ABC transporter, ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  
 0.974
modB
MOLYBDENUM TRANSPORT SYSTEM PERMEASE; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.812
EDM24170.1
Hypothetical protein; COG0731 Fe-S oxidoreductases.
 
     0.560
EDM23006.1
Hypothetical protein.
  
     0.555
EDM24552.1
COG2864 Cytochrome b subunit of formate dehydrogenase.
     
 0.526
EDM24551.1
Formate dehydrogenase, iron-sulfur chain; COG0437 Fe-S-cluster-containing hydrogenase components 1.
       0.523
EDM24550.1
Formate dehydrogenase, chain A; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.514
EDM24543.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
 
   
 0.507
fdhD
Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.480
Your Current Organism:
Caminibacter mediatlanticus
NCBI taxonomy Id: 391592
Other names: C. mediatlanticus TB-2, Caminibacter mediatlanticus DSM 16658, Caminibacter mediatlanticus TB-2, Caminibacter mediatlanticus str. TB-2, Caminibacter mediatlanticus strain TB-2
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