STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM23877.1Molybdopterin oxidoreductase; COG3383 Uncharacterized anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (679 aa)    
Predicted Functional Partners:
EDM24552.1
COG2864 Cytochrome b subunit of formate dehydrogenase.
  
 
 0.947
EDM24551.1
Formate dehydrogenase, iron-sulfur chain; COG0437 Fe-S-cluster-containing hydrogenase components 1.
  
 
 0.933
EDM24281.1
Iron-sulfur cluster-binding protein CooF; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.932
EDM24567.1
Molybdopterin oxidoreductase Fe4S4 region; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.927
EDM24550.1
Formate dehydrogenase, chain A; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 
0.900
EDM24561.1
HYDROGENASE 4 SUBUNIT; COG3262 Ni,Fe-hydrogenase III component G.
  
 
 0.900
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.802
EDM23694.1
COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain.
     
  0.800
EDM23695.1
COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
     
  0.800
Your Current Organism:
Caminibacter mediatlanticus
NCBI taxonomy Id: 391592
Other names: C. mediatlanticus TB-2, Caminibacter mediatlanticus DSM 16658, Caminibacter mediatlanticus TB-2, Caminibacter mediatlanticus str. TB-2, Caminibacter mediatlanticus strain TB-2
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