STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI92429.1ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (360 aa)    
Predicted Functional Partners:
AEI92428.1
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
AEI92430.1
Ribose import ATP-binding protein.
 
 
 0.992
AEI92427.1
Putative basic membrane protein.
 
 
 0.985
AEI95020.1
Branched chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.983
AEI95907.1
Branched chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
AEI95018.1
ABC transporter ATP-binding protein.
 
 
 0.979
AEI95904.1
ABC transporter ATP-binding protein.
 
 
 0.978
AEI95909.1
Putative basic membrane protein.
 
 
 0.961
AEI95017.1
Basic membrane lipoprotein.
 
 
 0.958
AEI95242.1
Putative basic membrane lipoprotein.
 
 
 0.958
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.