STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI92711.1Carbohydrate kinase, FGGY family; Belongs to the FGGY kinase family. (495 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase XylA; Belongs to the xylose isomerase family.
 
 
 0.956
xylB
Xylulose kinase XylB.
  
  
 
0.927
AEI92875.1
Putative xylulose kinase; Belongs to the FGGY kinase family.
  
  
 
0.927
cfxE
Ribulose-phosphate 3-epimerase, chromosomal; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.923
AEI92869.1
D-xylose reductase.
 
 
 0.921
AEI93516.1
Hypothetical protein DUF1498.
    
  0.903
rhaM
L-rhamnose mutarotase RhaM; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.616
AEI92710.1
Putative pyridoxal 4-dehydrogenase.
  
    0.445
glpD1
Aerobic glycerol-3-phosphate dehydrogenase GlpD; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.429
fucA
L-fuculose phosphate aldolase FucA.
 
  
 0.403
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
Server load: low (16%) [HD]