STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI92738.1ABC transporter permease protein. (304 aa)    
Predicted Functional Partners:
AEI92739.1
Putative ABC transporter permease protein.
 
 0.965
AEI92736.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   0.910
AEI92737.1
Putative ABC transporter extracellular solute binding protein.
 
   0.853
AEI92872.1
Putative ABC transporter inner membrane component.
 
 0.847
AEI95219.1
ABC transporter permease protein.
 
 0.847
AEI95928.1
ABC transporter permease-like protein.
 
 
 0.846
AEI92856.1
Putative ABC transporter permease protein.
 
 0.844
AEI92583.1
ABC trans-affinity zinc uptake system membrane protein.
 
 0.841
AEI96221.1
ABC transporter permease protein.
 
 0.835
AEI92740.1
Hypothetical protein.
 
     0.834
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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