STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI93202.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
AEI93203.1
Cytochrome c-like protein.
 
     0.606
AEI93232.1
Hypothetical protein.
  
     0.573
AEI93028.1
Hypothetical protein.
  
     0.549
AEI93618.1
Hypothetical protein.
  
   
 0.512
AEI94668.1
Hypothetical protein.
  
     0.504
AEI94467.1
Hypothetical protein; Associated with NADH-quinone oxidoreductase.
  
     0.503
AEI95747.1
Putative phosphoglycerate mutase family protein.
  
     0.497
AEI93398.1
Hypothetical protein.
  
     0.460
AEI96112.1
Hypothetical protein.
  
   
 0.410
AEI94693.1
Hypothetical protein.
  
     0.405
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.