STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI93526.1Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (355 aa)    
Predicted Functional Partners:
AEI93524.1
Hypothetical protein.
 
     0.868
AEI93525.1
Hypothetical protein.
 
     0.864
AEI93527.1
Hypothetical protein.
 
     0.849
AEI94971.1
Putative exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.819
nuoEF
NADH-quinone oxidoreductase subunits NuoEF.
    
 0.784
miaB
RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
   
 0.654
AEI93528.1
Hypothetical protein.
 
     0.641
AEI93529.1
Hypothetical protein.
 
 
 
 0.548
AEI93427.1
Putative peroxiredoxin bcp.
  
  
 0.518
guaA
GMP synthase GuaA; Catalyzes the synthesis of GMP from XMP.
 
 
 
 0.510
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.