Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI92997.1 | AEI93593.1 | RLO149_c009860 | RLO149_c015980 | Hypothetical protein; Associated with PHB synthesis. | DNA binding helix-turn helix-like protein. | 0.496 |
AEI92997.1 | AEI93595.1 | RLO149_c009860 | RLO149_c016000 | Hypothetical protein; Associated with PHB synthesis. | Hypothetical protein. | 0.591 |
AEI92997.1 | AEI93633.1 | RLO149_c009860 | RLO149_c016400 | Hypothetical protein; Associated with PHB synthesis. | Hypothetical protein. | 0.530 |
AEI93438.1 | AEI93593.1 | RLO149_c014410 | RLO149_c015980 | Putative HTH-type transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family. | DNA binding helix-turn helix-like protein. | 0.577 |
AEI93590.1 | AEI93592.1 | RLO149_c015950 | RLO149_c015970 | Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Hypothetical protein. | 0.993 |
AEI93590.1 | AEI93593.1 | RLO149_c015950 | RLO149_c015980 | Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | DNA binding helix-turn helix-like protein. | 0.468 |
AEI93590.1 | AEI93596.1 | RLO149_c015950 | RLO149_c016010 | Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Sensor transduction histidine kinase. | 0.434 |
AEI93592.1 | AEI93590.1 | RLO149_c015970 | RLO149_c015950 | Hypothetical protein. | Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.993 |
AEI93592.1 | AEI93593.1 | RLO149_c015970 | RLO149_c015980 | Hypothetical protein. | DNA binding helix-turn helix-like protein. | 0.630 |
AEI93592.1 | AEI93596.1 | RLO149_c015970 | RLO149_c016010 | Hypothetical protein. | Sensor transduction histidine kinase. | 0.566 |
AEI93593.1 | AEI92997.1 | RLO149_c015980 | RLO149_c009860 | DNA binding helix-turn helix-like protein. | Hypothetical protein; Associated with PHB synthesis. | 0.496 |
AEI93593.1 | AEI93438.1 | RLO149_c015980 | RLO149_c014410 | DNA binding helix-turn helix-like protein. | Putative HTH-type transcriptional regulator, lysR family; Belongs to the LysR transcriptional regulatory family. | 0.577 |
AEI93593.1 | AEI93590.1 | RLO149_c015980 | RLO149_c015950 | DNA binding helix-turn helix-like protein. | Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.468 |
AEI93593.1 | AEI93592.1 | RLO149_c015980 | RLO149_c015970 | DNA binding helix-turn helix-like protein. | Hypothetical protein. | 0.630 |
AEI93593.1 | AEI93594.1 | RLO149_c015980 | RLO149_c015990 | DNA binding helix-turn helix-like protein. | Putative response regulator receiver protein, CheY like protein. | 0.735 |
AEI93593.1 | AEI93595.1 | RLO149_c015980 | RLO149_c016000 | DNA binding helix-turn helix-like protein. | Hypothetical protein. | 0.801 |
AEI93593.1 | AEI93596.1 | RLO149_c015980 | RLO149_c016010 | DNA binding helix-turn helix-like protein. | Sensor transduction histidine kinase. | 0.789 |
AEI93593.1 | AEI93597.1 | RLO149_c015980 | RLO149_c016020 | DNA binding helix-turn helix-like protein. | Hypothetical protein. | 0.590 |
AEI93593.1 | AEI93633.1 | RLO149_c015980 | RLO149_c016400 | DNA binding helix-turn helix-like protein. | Hypothetical protein. | 0.473 |
AEI93593.1 | glcB | RLO149_c015980 | RLO149_c025420 | DNA binding helix-turn helix-like protein. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.494 |
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