STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI93931.1Hypothetical protein. (507 aa)    
Predicted Functional Partners:
AEI93930.1
Hypothetical protein.
 
    0.972
AEI93929.1
Hypothetical protein.
 
     0.966
AEI96083.1
Response regulator receiver protein; Containing a PP2C-like phosphatase domain.
  
    0.897
AEI94007.1
Putative heme NO binding protein.
   
    0.895
flbT
Putative flagellin synthesis repressor protein FlbT.
   
    0.886
AEI93264.1
Hypothetical protein.
 
  
 0.875
AEI93261.1
Hypothetical protein.
 
  
 0.841
AEI93259.1
Type II secretion system protein F-like protein.
 
  
 0.793
AEI95819.1
Putative serine-protein kinase; Anti-sigma factor.
  
    0.782
AEI93258.1
Type II secretion system protein F-like protein.
 
    0.759
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.