Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI93201.1 | AEI94328.1 | RLO149_c011970 | RLO149_c023580 | Hypothetical protein. | Hypothetical protein. | 0.552 |
AEI93201.1 | AEI94397.1 | RLO149_c011970 | RLO149_c024290 | Hypothetical protein. | Polysaccharide deacetylase-like protein. | 0.464 |
AEI94324.1 | AEI94328.1 | RLO149_c023540 | RLO149_c023580 | Hypothetical protein. | Hypothetical protein. | 0.602 |
AEI94324.1 | AEI96042.1 | RLO149_c023540 | RLO149_c041460 | Hypothetical protein. | Hypothetical protein; Containing a PAS domain. | 0.447 |
AEI94324.1 | prfA | RLO149_c023540 | RLO149_c023570 | Hypothetical protein. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.828 |
AEI94324.1 | prmC | RLO149_c023540 | RLO149_c023560 | Hypothetical protein. | Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.828 |
AEI94328.1 | AEI93201.1 | RLO149_c023580 | RLO149_c011970 | Hypothetical protein. | Hypothetical protein. | 0.552 |
AEI94328.1 | AEI94324.1 | RLO149_c023580 | RLO149_c023540 | Hypothetical protein. | Hypothetical protein. | 0.602 |
AEI94328.1 | AEI94397.1 | RLO149_c023580 | RLO149_c024290 | Hypothetical protein. | Polysaccharide deacetylase-like protein. | 0.518 |
AEI94328.1 | AEI96042.1 | RLO149_c023580 | RLO149_c041460 | Hypothetical protein. | Hypothetical protein; Containing a PAS domain. | 0.577 |
AEI94328.1 | hipO1 | RLO149_c023580 | RLO149_c023610 | Hypothetical protein. | Hippurate hydrolase HipO. | 0.659 |
AEI94328.1 | mazG | RLO149_c023580 | RLO149_c023620 | Hypothetical protein. | Protein MazG. | 0.616 |
AEI94328.1 | prfA | RLO149_c023580 | RLO149_c023570 | Hypothetical protein. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.656 |
AEI94328.1 | prmC | RLO149_c023580 | RLO149_c023560 | Hypothetical protein. | Modification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.695 |
AEI94328.1 | speB1 | RLO149_c023580 | RLO149_c023600 | Hypothetical protein. | Agmatinase SpeB; Belongs to the arginase family. | 0.675 |
AEI94328.1 | speB2 | RLO149_c023580 | RLO149_c023590 | Hypothetical protein. | Agmatinase SpeB; Belongs to the arginase family. | 0.675 |
AEI94397.1 | AEI93201.1 | RLO149_c024290 | RLO149_c011970 | Polysaccharide deacetylase-like protein. | Hypothetical protein. | 0.464 |
AEI94397.1 | AEI94328.1 | RLO149_c024290 | RLO149_c023580 | Polysaccharide deacetylase-like protein. | Hypothetical protein. | 0.518 |
AEI94397.1 | AEI96042.1 | RLO149_c024290 | RLO149_c041460 | Polysaccharide deacetylase-like protein. | Hypothetical protein; Containing a PAS domain. | 0.633 |
AEI96042.1 | AEI94324.1 | RLO149_c041460 | RLO149_c023540 | Hypothetical protein; Containing a PAS domain. | Hypothetical protein. | 0.447 |
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