Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI94328.1 | hipO1 | RLO149_c023580 | RLO149_c023610 | Hypothetical protein. | Hippurate hydrolase HipO. | 0.659 |
AEI94328.1 | mazG | RLO149_c023580 | RLO149_c023620 | Hypothetical protein. | Protein MazG. | 0.616 |
AEI94328.1 | speB1 | RLO149_c023580 | RLO149_c023600 | Hypothetical protein. | Agmatinase SpeB; Belongs to the arginase family. | 0.675 |
AEI94328.1 | speB2 | RLO149_c023580 | RLO149_c023590 | Hypothetical protein. | Agmatinase SpeB; Belongs to the arginase family. | 0.675 |
dapD | hipO1 | RLO149_c043910 | RLO149_c023610 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD; Belongs to the transferase hexapeptide repeat family. | Hippurate hydrolase HipO. | 0.521 |
hipO1 | AEI94328.1 | RLO149_c023610 | RLO149_c023580 | Hippurate hydrolase HipO. | Hypothetical protein. | 0.659 |
hipO1 | dapD | RLO149_c023610 | RLO149_c043910 | Hippurate hydrolase HipO. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase DapD; Belongs to the transferase hexapeptide repeat family. | 0.521 |
hipO1 | mazG | RLO149_c023610 | RLO149_c023620 | Hippurate hydrolase HipO. | Protein MazG. | 0.603 |
hipO1 | speB1 | RLO149_c023610 | RLO149_c023600 | Hippurate hydrolase HipO. | Agmatinase SpeB; Belongs to the arginase family. | 0.784 |
hipO1 | speB2 | RLO149_c023610 | RLO149_c023590 | Hippurate hydrolase HipO. | Agmatinase SpeB; Belongs to the arginase family. | 0.784 |
mazG | AEI94328.1 | RLO149_c023620 | RLO149_c023580 | Protein MazG. | Hypothetical protein. | 0.616 |
mazG | hipO1 | RLO149_c023620 | RLO149_c023610 | Protein MazG. | Hippurate hydrolase HipO. | 0.603 |
mazG | speB1 | RLO149_c023620 | RLO149_c023600 | Protein MazG. | Agmatinase SpeB; Belongs to the arginase family. | 0.594 |
mazG | speB2 | RLO149_c023620 | RLO149_c023590 | Protein MazG. | Agmatinase SpeB; Belongs to the arginase family. | 0.594 |
speB1 | AEI94328.1 | RLO149_c023600 | RLO149_c023580 | Agmatinase SpeB; Belongs to the arginase family. | Hypothetical protein. | 0.675 |
speB1 | hipO1 | RLO149_c023600 | RLO149_c023610 | Agmatinase SpeB; Belongs to the arginase family. | Hippurate hydrolase HipO. | 0.784 |
speB1 | mazG | RLO149_c023600 | RLO149_c023620 | Agmatinase SpeB; Belongs to the arginase family. | Protein MazG. | 0.594 |
speB1 | speB2 | RLO149_c023600 | RLO149_c023590 | Agmatinase SpeB; Belongs to the arginase family. | Agmatinase SpeB; Belongs to the arginase family. | 0.813 |
speB2 | AEI94328.1 | RLO149_c023590 | RLO149_c023580 | Agmatinase SpeB; Belongs to the arginase family. | Hypothetical protein. | 0.675 |
speB2 | hipO1 | RLO149_c023590 | RLO149_c023610 | Agmatinase SpeB; Belongs to the arginase family. | Hippurate hydrolase HipO. | 0.784 |
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