Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI92611.1 | AEI95007.1 | RLO149_c005830 | RLO149_c030510 | Glutamate synthase-like protein; Belongs to the glutamate synthase family. | Hypothetical protein, iron-binding protein. | 0.423 |
AEI95005.1 | AEI95007.1 | RLO149_c030490 | RLO149_c030510 | Putative AsmA family protein. | Hypothetical protein, iron-binding protein. | 0.428 |
AEI95005.1 | AEI95008.1 | RLO149_c030490 | RLO149_c030520 | Putative AsmA family protein. | Hypothetical protein DUF393. | 0.404 |
AEI95005.1 | rimO | RLO149_c030490 | RLO149_c030500 | Putative AsmA family protein. | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.665 |
AEI95007.1 | AEI92611.1 | RLO149_c030510 | RLO149_c005830 | Hypothetical protein, iron-binding protein. | Glutamate synthase-like protein; Belongs to the glutamate synthase family. | 0.423 |
AEI95007.1 | AEI95005.1 | RLO149_c030510 | RLO149_c030490 | Hypothetical protein, iron-binding protein. | Putative AsmA family protein. | 0.428 |
AEI95007.1 | AEI95008.1 | RLO149_c030510 | RLO149_c030520 | Hypothetical protein, iron-binding protein. | Hypothetical protein DUF393. | 0.558 |
AEI95007.1 | rimO | RLO149_c030510 | RLO149_c030500 | Hypothetical protein, iron-binding protein. | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.591 |
AEI95008.1 | AEI95005.1 | RLO149_c030520 | RLO149_c030490 | Hypothetical protein DUF393. | Putative AsmA family protein. | 0.404 |
AEI95008.1 | AEI95007.1 | RLO149_c030520 | RLO149_c030510 | Hypothetical protein DUF393. | Hypothetical protein, iron-binding protein. | 0.558 |
AEI95008.1 | rimO | RLO149_c030520 | RLO149_c030500 | Hypothetical protein DUF393. | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.463 |
rimO | AEI95005.1 | RLO149_c030500 | RLO149_c030490 | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Putative AsmA family protein. | 0.665 |
rimO | AEI95007.1 | RLO149_c030500 | RLO149_c030510 | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Hypothetical protein, iron-binding protein. | 0.591 |
rimO | AEI95008.1 | RLO149_c030500 | RLO149_c030520 | Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Hypothetical protein DUF393. | 0.463 |