STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI95008.1Hypothetical protein DUF393. (129 aa)    
Predicted Functional Partners:
AEI94296.1
Hypothetical protein.
 
     0.606
AEI92395.1
Hypothetical protein.
 
     0.600
AEI95007.1
Hypothetical protein, iron-binding protein.
       0.558
AEI93577.1
Hypothetical protein.
 
     0.520
AEI92587.1
Hypothetical protein.
 
     0.513
AEI96007.1
Hypothetical protein.
  
     0.491
AEI94572.1
Monovalent cation/proton antiporter subunit G.
   
    0.487
rimO
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.463
AEI94312.1
Putative bacteriochlorophyll synthase; 4-vinyl reductase.
  
     0.439
AEI94556.1
Hypothetical protein.
  
    0.437
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.