Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEI95244.1 | AEI95245.1 | RLO149_c033000 | RLO149_c033010 | Nuclease-like protein. | Hypothetical protein DUF302. | 0.445 |
AEI95244.1 | AEI95272.1 | RLO149_c033000 | RLO149_c033310 | Nuclease-like protein. | Putative fatty acid hydroxylase. | 0.572 |
AEI95244.1 | AEI95332.1 | RLO149_c033000 | RLO149_c033910 | Nuclease-like protein. | Hypothetical protein. | 0.489 |
AEI95244.1 | fliI | RLO149_c033000 | RLO149_c043370 | Nuclease-like protein. | Flagellum-specific ATP synthase FliI. | 0.400 |
AEI95244.1 | ribD | RLO149_c033000 | RLO149_c029190 | Nuclease-like protein. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.438 |
AEI95244.1 | rnpA | RLO149_c033000 | RLO149_c033230 | Nuclease-like protein. | Putative ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.489 |
AEI95245.1 | AEI95244.1 | RLO149_c033010 | RLO149_c033000 | Hypothetical protein DUF302. | Nuclease-like protein. | 0.445 |
AEI95272.1 | AEI95244.1 | RLO149_c033310 | RLO149_c033000 | Putative fatty acid hydroxylase. | Nuclease-like protein. | 0.572 |
AEI95332.1 | AEI95244.1 | RLO149_c033910 | RLO149_c033000 | Hypothetical protein. | Nuclease-like protein. | 0.489 |
fliI | AEI95244.1 | RLO149_c043370 | RLO149_c033000 | Flagellum-specific ATP synthase FliI. | Nuclease-like protein. | 0.400 |
ribD | AEI95244.1 | RLO149_c029190 | RLO149_c033000 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Nuclease-like protein. | 0.438 |
rnpA | AEI95244.1 | RLO149_c033230 | RLO149_c033000 | Putative ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Nuclease-like protein. | 0.489 |