STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI95346.1Putative P-loop containing ATPase; Displays ATPase and GTPase activities. (295 aa)    
Predicted Functional Partners:
AEI95347.1
HPr serine kinase-like protein.
   
 0.949
ptsO
Phosphocarrier protein NPr.
  
  
 0.894
AEI95345.1
PTS system mannose-specific EIIA component-like protein.
 
   
 0.894
chvG
Two component signal transduction histidine kinase ChvG.
       0.835
ptsN
Nitrogen regulatory protein PtsN.
  
  
 0.765
AEI94981.1
Ribonuclease-like protein.
 
 
 
 0.697
AEI95343.1
Phosphate acyltransferase-like protein.
       0.691
rne
Ribonulcease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
   
 
 0.659
glmM
Phosphoglucosamine mutase GlmM; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
   
 0.640
chvI
Two component signal transduction response regulator receiver protein ChvI.
  
    0.626
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.