STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI95563.1Putative signaling protein; With diguanylate cyclase activity. (459 aa)    
Predicted Functional Partners:
AEI96083.1
Response regulator receiver protein; Containing a PP2C-like phosphatase domain.
  
 
 0.958
AEI96136.1
Sensor transduction histidine kinase.
  
 0.922
AEI94306.1
Putative regulatory protein; Containing CheR and CheB-like domains.
 
 
 0.905
AEI94176.1
Multi-sensor hybrid histidine kinase.
 
 0.895
AEI95633.1
Putative signaling protein; With diguanylate cyclase activity.
 
 
0.883
AEI93353.1
Putative signaling protein with cGMP specific phosphodiesterase activity.
 
 
0.863
AEI95267.1
Putative diguanylate phosphodiesterase.
 
  
0.840
AEI96082.1
Hypothetical protein; Containing an Hpt domain.
  
  
 0.826
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.817
fliG
Putative flagellar motor switch protein FliG.
  
  
 0.807
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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