STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34924.1COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. (204 aa)    
Predicted Functional Partners:
EDM34923.1
Hypothetical protein; COG4927 Predicted choloylglycine hydrolase.
 
     0.809
EDM38367.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.678
EDM38368.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.678
EDM38369.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.678
EDM38039.1
Cyclic nucleotide binding-regulatory protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
  
  0.673
EDM34921.1
Putative outer membrane protein; Probably involved in nutrient binding.
 
     0.614
EDM34920.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.581
EDM37802.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
  
 0.571
EDM36391.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.549
EDM37727.1
COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
    
  0.516
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.