Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM33977.1 | EDM33978.1 | PBAL39_05833 | PBAL39_05838 | Hypothetical protein. | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | 0.947 |
EDM33977.1 | EDM33981.1 | PBAL39_05833 | PBAL39_05853 | Hypothetical protein. | Putative outer membrane protein; Probably involved in nutrient binding. | 0.716 |
EDM33977.1 | EDM35577.1 | PBAL39_05833 | PBAL39_03509 | Hypothetical protein. | COG1524 Uncharacterized proteins of the AP superfamily. | 0.788 |
EDM33977.1 | EDM38120.1 | PBAL39_05833 | PBAL39_00857 | Hypothetical protein. | Hypothetical protein. | 0.574 |
EDM33978.1 | EDM33977.1 | PBAL39_05838 | PBAL39_05833 | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | Hypothetical protein. | 0.947 |
EDM33978.1 | EDM33981.1 | PBAL39_05838 | PBAL39_05853 | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | Putative outer membrane protein; Probably involved in nutrient binding. | 0.908 |
EDM33978.1 | EDM35577.1 | PBAL39_05838 | PBAL39_03509 | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | COG1524 Uncharacterized proteins of the AP superfamily. | 0.789 |
EDM33978.1 | EDM35585.1 | PBAL39_05838 | PBAL39_03549 | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | Putative outer membrane protein; Probably involved in nutrient binding. | 0.792 |
EDM33978.1 | EDM36975.1 | PBAL39_05838 | PBAL39_18914 | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | Hypothetical protein; COG0841 Cation/multidrug efflux pump. | 0.487 |
EDM33978.1 | EDM38120.1 | PBAL39_05838 | PBAL39_00857 | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | Hypothetical protein. | 0.604 |
EDM33981.1 | EDM33977.1 | PBAL39_05853 | PBAL39_05833 | Putative outer membrane protein; Probably involved in nutrient binding. | Hypothetical protein. | 0.716 |
EDM33981.1 | EDM33978.1 | PBAL39_05853 | PBAL39_05838 | Putative outer membrane protein; Probably involved in nutrient binding. | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | 0.908 |
EDM33981.1 | EDM35577.1 | PBAL39_05853 | PBAL39_03509 | Putative outer membrane protein; Probably involved in nutrient binding. | COG1524 Uncharacterized proteins of the AP superfamily. | 0.787 |
EDM33981.1 | EDM36975.1 | PBAL39_05853 | PBAL39_18914 | Putative outer membrane protein; Probably involved in nutrient binding. | Hypothetical protein; COG0841 Cation/multidrug efflux pump. | 0.638 |
EDM33981.1 | EDM38120.1 | PBAL39_05853 | PBAL39_00857 | Putative outer membrane protein; Probably involved in nutrient binding. | Hypothetical protein. | 0.623 |
EDM34856.1 | EDM36469.1 | PBAL39_03130 | PBAL39_12212 | Hypothetical protein. | Hypothetical protein; COG4886 Leucine-rich repeat (LRR) protein. | 0.449 |
EDM34856.1 | EDM37846.1 | PBAL39_03130 | PBAL39_15514 | Hypothetical protein. | Hypothetical protein. | 0.432 |
EDM34856.1 | EDM38120.1 | PBAL39_03130 | PBAL39_00857 | Hypothetical protein. | Hypothetical protein. | 0.715 |
EDM35577.1 | EDM33977.1 | PBAL39_03509 | PBAL39_05833 | COG1524 Uncharacterized proteins of the AP superfamily. | Hypothetical protein. | 0.788 |
EDM35577.1 | EDM33978.1 | PBAL39_03509 | PBAL39_05838 | COG1524 Uncharacterized proteins of the AP superfamily. | Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. | 0.789 |
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