STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38213.1Hypothetical protein; COG0419 ATPase involved in DNA repair. (320 aa)    
Predicted Functional Partners:
EDM38212.1
COG3853 Uncharacterized protein involved in tellurite resistance; Belongs to the TelA family.
       0.870
EDM38208.1
Putative dehalogenase-hydrolase; COG1011 Predicted hydrolase (HAD superfamily).
       0.815
EDM38209.1
Hypothetical protein; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase.
       0.815
EDM38210.1
Stress protein; COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1.
       0.815
EDM38211.1
Stress response protein; COG2310 Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1.
       0.815
EDM38214.1
COG0861 Membrane protein TerC, possibly involved in tellurium resistance.
       0.680
EDM38207.1
Putative regulatory protein; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
       0.435
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.