Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM34092.1 | EDM38267.1 | PBAL39_05768 | PBAL39_01592 | TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.506 |
EDM34092.1 | EDM38268.1 | PBAL39_05768 | PBAL39_01597 | TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hypothetical protein. | 0.506 |
EDM34107.1 | EDM38267.1 | PBAL39_24320 | PBAL39_01592 | TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes. | Hypothetical protein. | 0.596 |
EDM34107.1 | EDM38268.1 | PBAL39_24320 | PBAL39_01597 | TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes. | Hypothetical protein. | 0.506 |
EDM34551.1 | EDM38267.1 | PBAL39_11155 | PBAL39_01592 | Hypothetical protein; COG0165 Argininosuccinate lyase. | Hypothetical protein. | 0.532 |
EDM35753.1 | EDM38267.1 | PBAL39_06226 | PBAL39_01592 | Hypothetical protein. | Hypothetical protein. | 0.562 |
EDM35753.1 | EDM38268.1 | PBAL39_06226 | PBAL39_01597 | Hypothetical protein. | Hypothetical protein. | 0.506 |
EDM36066.1 | EDM38267.1 | PBAL39_23702 | PBAL39_01592 | Hypothetical protein. | Hypothetical protein. | 0.663 |
EDM37161.1 | EDM38267.1 | PBAL39_05163 | PBAL39_01592 | Putative surface layer protein. | Hypothetical protein. | 0.545 |
EDM37161.1 | EDM38268.1 | PBAL39_05163 | PBAL39_01597 | Putative surface layer protein. | Hypothetical protein. | 0.545 |
EDM38265.1 | EDM38267.1 | PBAL39_01582 | PBAL39_01592 | Hypothetical protein. | Hypothetical protein. | 0.684 |
EDM38265.1 | miaA | PBAL39_01582 | PBAL39_01587 | Hypothetical protein. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.924 |
EDM38267.1 | EDM34092.1 | PBAL39_01592 | PBAL39_05768 | Hypothetical protein. | TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.506 |
EDM38267.1 | EDM34107.1 | PBAL39_01592 | PBAL39_24320 | Hypothetical protein. | TonB; COG0810 Periplasmic protein TonB, links inner and outer membranes. | 0.596 |
EDM38267.1 | EDM34551.1 | PBAL39_01592 | PBAL39_11155 | Hypothetical protein. | Hypothetical protein; COG0165 Argininosuccinate lyase. | 0.532 |
EDM38267.1 | EDM35753.1 | PBAL39_01592 | PBAL39_06226 | Hypothetical protein. | Hypothetical protein. | 0.562 |
EDM38267.1 | EDM36066.1 | PBAL39_01592 | PBAL39_23702 | Hypothetical protein. | Hypothetical protein. | 0.663 |
EDM38267.1 | EDM37161.1 | PBAL39_01592 | PBAL39_05163 | Hypothetical protein. | Putative surface layer protein. | 0.545 |
EDM38267.1 | EDM38265.1 | PBAL39_01592 | PBAL39_01582 | Hypothetical protein. | Hypothetical protein. | 0.684 |
EDM38267.1 | EDM38268.1 | PBAL39_01592 | PBAL39_01597 | Hypothetical protein. | Hypothetical protein. | 0.543 |
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