Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM37117.1 | EDM38401.1 | PBAL39_04943 | PBAL39_02262 | Hypothetical protein. | Putative sugar hydrolase; COG3537 Putative alpha-1,2-mannosidase. | 0.400 |
EDM38401.1 | EDM37117.1 | PBAL39_02262 | PBAL39_04943 | Putative sugar hydrolase; COG3537 Putative alpha-1,2-mannosidase. | Hypothetical protein. | 0.400 |
EDM38401.1 | mnmA | PBAL39_02262 | PBAL39_02267 | Putative sugar hydrolase; COG3537 Putative alpha-1,2-mannosidase. | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | 0.718 |
mnmA | EDM38401.1 | PBAL39_02267 | PBAL39_02262 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. | Putative sugar hydrolase; COG3537 Putative alpha-1,2-mannosidase. | 0.718 |