STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38435.1Putative permease domain protein; COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component. (864 aa)    
Predicted Functional Partners:
EDM38436.1
ABC transporter related protein; COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component.
 
 
 0.975
EDM38437.1
Lipase/Acylhydrolase; COG2755 Lysophospholipase L1 and related esterases.
 
     0.938
EDM38434.1
Hypothetical protein.
 
     0.822
EDM38438.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.524
EDM38015.1
Sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; COG2202 FOG: PAS/PAC domain.
  
     0.465
EDM38433.1
Hypothetical protein.
       0.444
EDM38537.1
ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.426
EDM36628.1
Possible oxidoreductase; COG0644 Dehydrogenases (flavoproteins).
  
     0.400
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.