STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35575.1Alpha-1,2-mannosidase, putative; COG3291 FOG: PKD repeat. (333 aa)    
Predicted Functional Partners:
EDM35576.1
Alpha-1,2-mannosidase, putative.
 
  
 
0.866
EDM35577.1
COG1524 Uncharacterized proteins of the AP superfamily.
 
     0.739
EDM35578.1
COG5651 PPE-repeat proteins.
 
     0.667
EDM35580.1
Hypothetical protein.
 
     0.618
EDM35581.1
Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.584
EDM35579.1
Hypothetical protein.
       0.524
EDM35584.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
     0.495
EDM35585.1
Putative outer membrane protein; Probably involved in nutrient binding.
 
     0.474
EDM35226.1
COG3209 Rhs family protein.
 
 
  0.458
EDM35582.1
Hypothetical protein.
       0.419
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.