Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM34550.1 | EDM37049.1 | PBAL39_11150 | PBAL39_04603 | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | Putative regulatory protein. | 0.479 |
EDM34883.1 | EDM37049.1 | PBAL39_00085 | PBAL39_04603 | Outer membrane receptor; ragA protein. | Putative regulatory protein. | 0.490 |
EDM37041.1 | EDM37042.1 | PBAL39_04563 | PBAL39_04568 | Hypothetical protein. | Conserved transmembrane protein found in conjugative transposon. | 0.973 |
EDM37041.1 | EDM37043.1 | PBAL39_04563 | PBAL39_04573 | Hypothetical protein. | Conserved protein found in conjugate transposon; COG2205 Osmosensitive K+ channel histidine kinase. | 0.951 |
EDM37041.1 | EDM37044.1 | PBAL39_04563 | PBAL39_04578 | Hypothetical protein. | Hypothetical protein. | 0.947 |
EDM37041.1 | EDM37045.1 | PBAL39_04563 | PBAL39_04583 | Hypothetical protein. | Conjugative transposon protein TraI; COG0098 Ribosomal protein S5. | 0.938 |
EDM37041.1 | EDM37046.1 | PBAL39_04563 | PBAL39_04588 | Hypothetical protein. | Hypothetical protein. | 0.758 |
EDM37041.1 | EDM37047.1 | PBAL39_04563 | PBAL39_04593 | Hypothetical protein. | Conserved protein found in conjugate transposon; COG3451 Type IV secretory pathway, VirB4 components. | 0.961 |
EDM37041.1 | EDM37049.1 | PBAL39_04563 | PBAL39_04603 | Hypothetical protein. | Putative regulatory protein. | 0.719 |
EDM37042.1 | EDM37041.1 | PBAL39_04568 | PBAL39_04563 | Conserved transmembrane protein found in conjugative transposon. | Hypothetical protein. | 0.973 |
EDM37042.1 | EDM37043.1 | PBAL39_04568 | PBAL39_04573 | Conserved transmembrane protein found in conjugative transposon. | Conserved protein found in conjugate transposon; COG2205 Osmosensitive K+ channel histidine kinase. | 0.954 |
EDM37042.1 | EDM37044.1 | PBAL39_04568 | PBAL39_04578 | Conserved transmembrane protein found in conjugative transposon. | Hypothetical protein. | 0.952 |
EDM37042.1 | EDM37045.1 | PBAL39_04568 | PBAL39_04583 | Conserved transmembrane protein found in conjugative transposon. | Conjugative transposon protein TraI; COG0098 Ribosomal protein S5. | 0.941 |
EDM37042.1 | EDM37046.1 | PBAL39_04568 | PBAL39_04588 | Conserved transmembrane protein found in conjugative transposon. | Hypothetical protein. | 0.664 |
EDM37042.1 | EDM37047.1 | PBAL39_04568 | PBAL39_04593 | Conserved transmembrane protein found in conjugative transposon. | Conserved protein found in conjugate transposon; COG3451 Type IV secretory pathway, VirB4 components. | 0.934 |
EDM37042.1 | EDM37049.1 | PBAL39_04568 | PBAL39_04603 | Conserved transmembrane protein found in conjugative transposon. | Putative regulatory protein. | 0.604 |
EDM37043.1 | EDM37041.1 | PBAL39_04573 | PBAL39_04563 | Conserved protein found in conjugate transposon; COG2205 Osmosensitive K+ channel histidine kinase. | Hypothetical protein. | 0.951 |
EDM37043.1 | EDM37042.1 | PBAL39_04573 | PBAL39_04568 | Conserved protein found in conjugate transposon; COG2205 Osmosensitive K+ channel histidine kinase. | Conserved transmembrane protein found in conjugative transposon. | 0.954 |
EDM37043.1 | EDM37044.1 | PBAL39_04573 | PBAL39_04578 | Conserved protein found in conjugate transposon; COG2205 Osmosensitive K+ channel histidine kinase. | Hypothetical protein. | 0.846 |
EDM37043.1 | EDM37045.1 | PBAL39_04573 | PBAL39_04583 | Conserved protein found in conjugate transposon; COG2205 Osmosensitive K+ channel histidine kinase. | Conjugative transposon protein TraI; COG0098 Ribosomal protein S5. | 0.821 |
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