STRINGSTRING
PBAL39_04603 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_04603" - Putative regulatory protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_04603Putative regulatory protein (301 aa)    
Predicted Functional Partners:
PBAL39_04598
Uncharacterized protein (717 aa)
              0.859
PBAL39_04593
Conserved protein found in conjugate transposon (514 aa)
 
          0.831
PBAL39_04563
Uncharacterized protein (212 aa)
 
          0.781
PBAL39_04568
Conserved transmembrane protein found in conjugative transposon (393 aa)
 
          0.708
PBAL39_21880
Transcriptional regulator (101 aa)
   
          0.666
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
 
          0.603
PBAL39_04573
Conserved protein found in conjugate transposon (213 aa)
 
          0.601
PBAL39_04588
Uncharacterized protein (126 aa)
              0.571
PBAL39_25575
Ferrichrome-iron receptor (762 aa)
   
          0.550
PBAL39_12820
Sensor histidine kinase (528 aa)
   
          0.537
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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