STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37164.1COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism. (293 aa)    
Predicted Functional Partners:
EDM37166.1
Hypothetical protein.
 
     0.893
EDM37163.1
Sulfotransferase.
 
     0.873
EDM37165.1
COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism.
 
    
0.840
EDM37169.1
Hypothetical protein.
 
     0.828
EDM37299.1
Hypothetical protein.
  
     0.774
EDM37300.1
Hypothetical protein.
 
     0.774
EDM37171.1
Hypothetical protein.
 
     0.763
EDM37167.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
 
     0.705
EDM37296.1
Sulfotransferase.
 
     0.703
EDM37311.1
COG4675 Microcystin-dependent protein.
  
     0.578
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.