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PBAL39_05553 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05553" - Probable polysaccharide biosynthesis protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05553Probable polysaccharide biosynthesis protein (443 aa)    
Predicted Functional Partners:
PBAL39_05568
Sugar transferase (300 aa)
 
          0.885
PBAL39_14334
Sugar transferase (311 aa)
 
          0.811
PBAL39_10471
Methyltransferase FkbM (319 aa)
 
          0.762
PBAL39_04973
Tyrosine-protein kinase (801 aa)
   
 
  0.698
PBAL39_05548
Uncharacterized protein (172 aa)
              0.679
PBAL39_05533
Uncharacterized protein (337 aa)
 
          0.653
PBAL39_05543
Probable haloacid dehalogenase-like hydrolase (230 aa)
              0.643
PBAL39_05538
Uracil phosphoribosyltransferase (214 aa)
         
  0.613
PBAL39_05583
Glycosyl transferase, group 1 (423 aa)
 
          0.579
PBAL39_03664
UDP-glucose/GDP-mannose dehydrogenase (418 aa)
 
 
 
  0.567
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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