STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37253.1Cyclic nucleotide binding-regulatory protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases. (195 aa)    
Predicted Functional Partners:
EDM37252.1
Hypothetical protein.
       0.853
EDM37249.1
Uncharacterized enzyme; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
  0.800
EDM37251.1
Hypothetical protein; COG0143 Methionyl-tRNA synthetase.
    
  0.779
EDM37250.1
Hypothetical protein; COG0518 GMP synthase - Glutamine amidotransferase domain.
       0.771
EDM34302.1
COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
     0.768
EDM37254.1
Hypothetical protein; Belongs to the UPF0312 family.
       0.749
EDM38367.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.678
EDM38368.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.678
EDM38369.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
    
 0.678
EDM37802.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
  
 0.571
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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