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PBAL39_05623 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_05623" - Cyclic nucleotide binding-regulatory protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_05623Cyclic nucleotide binding-regulatory protein (195 aa)    
Predicted Functional Partners:
PBAL39_05618
Uncharacterized protein (53 aa)
              0.815
PBAL39_12578
Uncharacterized protein (215 aa)
   
          0.778
PBAL39_05613
Uncharacterized protein (395 aa)
              0.655
PBAL39_05608
Uncharacterized protein (282 aa)
              0.655
PBAL39_05603
Gamma-glutamylcysteine synthetase 2 ; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity (367 aa)
              0.655
PBAL39_05628
Uncharacterized protein (176 aa)
              0.613
PBAL39_05598
GTP-binding elongation factor (601 aa)
              0.466
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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