STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35542.1Transcriptional regulator, Crp/Fnr family protein; COG2133 Glucose/sorbosone dehydrogenases. (891 aa)    
Predicted Functional Partners:
EDM38429.1
Probable large, multifunctional secreted protein; COG2133 Glucose/sorbosone dehydrogenases.
 
  
  0.998
EDM37319.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
 
 
0.995
EDM37314.1
Hypothetical protein; COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold.
 
     0.854
EDM35647.1
COG4654 Cytochrome c551/c552.
  
  
 
0.853
EDM37317.1
Hypothetical protein; COG0371 Glycerol dehydrogenase and related enzymes.
 
  
 0.807
EDM37409.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 
 0.793
EDM36790.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.782
EDM35144.1
Possible gluconolactonase precursor; COG3386 Gluconolactonase.
 
  
 0.772
EDM36809.1
Mulitcopper oxidase domain protein; COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.772
EDM38925.1
Hypothetical protein.
 
 0.763
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.