STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34965.1Acetyl esterase (acetylxylosidase); COG0627 Predicted esterase. (281 aa)    
Predicted Functional Partners:
EDM37409.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
 
  0.719
EDM37769.1
Zinc-type alcohol dehydrogenase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
   
 
 0.638
EDM38614.1
Hypothetical protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
 
  
  0.620
EDM35326.1
Undecaprenyl-phosphomannose:protein mannosyltransferase; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
    
  0.565
prpB
2-methylisocitrate lyase.
       0.561
EDM36157.1
Esterase/lipase/thioesterase family protein; COG0657 Esterase/lipase.
 
  
 0.532
EDM37704.1
COG0657 Esterase/lipase.
 
  
 0.509
EDM38873.1
COG2382 Enterochelin esterase and related enzymes.
  
 
0.500
EDM38251.1
Amino acid adenylation; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.497
EDM34967.1
Hypothetical protein; COG2995 Uncharacterized paraquat-inducible protein A.
       0.482
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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