node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplI | PBAL39_06941 | PBAL39_07895 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.999 |
rplA | rplJ | PBAL39_06941 | PBAL39_06936 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplA | rplK | PBAL39_06941 | PBAL39_06946 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplQ | PBAL39_06941 | PBAL39_08285 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | COG0203 Ribosomal protein L17. | 0.999 |
rplA | rpsD | PBAL39_06941 | PBAL39_08295 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
rplA | rpsF | PBAL39_06941 | PBAL39_07905 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplA | rpsK | PBAL39_06941 | PBAL39_08300 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplA | rpsO | PBAL39_06941 | PBAL39_00927 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rplA | rpsR | PBAL39_06941 | PBAL39_07900 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
rplA | rpsS | PBAL39_06941 | PBAL39_08405 | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rplI | rplA | PBAL39_07895 | PBAL39_06941 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.999 |
rplI | rplJ | PBAL39_07895 | PBAL39_06936 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.999 |
rplI | rplK | PBAL39_07895 | PBAL39_06946 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplI | rplQ | PBAL39_07895 | PBAL39_08285 | 50S ribosomal protein L9; Binds to the 23S rRNA. | COG0203 Ribosomal protein L17. | 0.999 |
rplI | rpsD | PBAL39_07895 | PBAL39_08295 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
rplI | rpsF | PBAL39_07895 | PBAL39_07905 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplI | rpsK | PBAL39_07895 | PBAL39_08300 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
rplI | rpsO | PBAL39_07895 | PBAL39_00927 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
rplI | rpsR | PBAL39_07895 | PBAL39_07900 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
rplI | rpsS | PBAL39_07895 | PBAL39_08405 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |