STRINGSTRING
PBAL39_08475 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08475" - Glycosyl hydrolase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08475Glycosyl hydrolase (908 aa)    
Predicted Functional Partners:
PBAL39_20930
Alpha-galactosidase (Melibiase) (731 aa)
 
   
  0.755
PBAL39_08470
Uncharacterized protein (73 aa)
              0.734
uxaC
Uronic isomerase (459 aa)
       
    0.685
PBAL39_10786
Uncharacterized protein (474 aa)
 
   
  0.682
PBAL39_24635
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (332 aa)
   
 
  0.672
PBAL39_18249
LacX protein, putative (290 aa)
   
 
  0.672
PBAL39_13892
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (379 aa)
   
 
  0.672
PBAL39_02117
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (345 aa)
   
 
  0.672
PBAL39_13929
Putative exported beta-galactosidase (594 aa)
 
 
  0.665
PBAL39_19504
Beta-xylosidase (1,4-beta-D-xylan xylosidase) (535 aa)
 
   
  0.663
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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