STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35100.1Glycosyl hydrolase; COG3250 Beta-galactosidase/beta-glucuronidase. (908 aa)    
Predicted Functional Partners:
EDM34661.1
Putative exported beta-galactosidase; COG1874 Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.703
EDM35099.1
Hypothetical protein.
       0.661
EDM35341.1
Arylsulfatase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  0.634
EDM33999.1
ROK family member transcriptional repressor; COG1482 Phosphomannose isomerase.
 
  
 0.558
EDM35101.1
Hypothetical protein.
       0.537
EDM37625.1
Hypothetical protein; COG3669 Alpha-L-fucosidase.
  
     0.518
EDM36071.1
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.465
EDM34914.1
COG3250 Beta-galactosidase/beta-glucuronidase.
  
  
  0.446
EDM34027.1
Hypothetical protein; COG4409 Neuraminidase (sialidase).
  
     0.429
EDM34327.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.428
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.