Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM34380.1 | EDM34381.1 | PBAL39_08836 | PBAL39_08841 | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; COG0438 Glycosyltransferase. | Hypothetical protein. | 0.760 |
EDM34380.1 | tilS | PBAL39_08836 | PBAL39_08846 | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; COG0438 Glycosyltransferase. | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.701 |
EDM34381.1 | EDM34380.1 | PBAL39_08841 | PBAL39_08836 | Hypothetical protein. | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; COG0438 Glycosyltransferase. | 0.760 |
EDM34381.1 | EDM34383.1 | PBAL39_08841 | PBAL39_08851 | Hypothetical protein. | COG0810 Periplasmic protein TonB, links inner and outer membranes. | 0.499 |
EDM34381.1 | tilS | PBAL39_08841 | PBAL39_08846 | Hypothetical protein. | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.782 |
EDM34383.1 | EDM34381.1 | PBAL39_08851 | PBAL39_08841 | COG0810 Periplasmic protein TonB, links inner and outer membranes. | Hypothetical protein. | 0.499 |
EDM34383.1 | tilS | PBAL39_08851 | PBAL39_08846 | COG0810 Periplasmic protein TonB, links inner and outer membranes. | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | 0.576 |
tilS | EDM34380.1 | PBAL39_08846 | PBAL39_08836 | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; COG0438 Glycosyltransferase. | 0.701 |
tilS | EDM34381.1 | PBAL39_08846 | PBAL39_08841 | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | Hypothetical protein. | 0.782 |
tilS | EDM34383.1 | PBAL39_08846 | PBAL39_08851 | tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. | COG0810 Periplasmic protein TonB, links inner and outer membranes. | 0.576 |