STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34389.1COG0584 Glycerophosphoryl diester phosphodiesterase. (293 aa)    
Predicted Functional Partners:
EDM36061.1
COG0578 Glycerol-3-phosphate dehydrogenase.
 
 0.874
EDM36930.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
  
  
  0.816
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 
 0.628
cysS
cysteinyl-tRNA synthetase.
       0.582
EDM38187.1
COG0247 Fe-S oxidoreductase.
  
 
  0.543
EDM34143.1
Oxidoreductase, iron-sulphur binding subunit; COG0247 Fe-S oxidoreductase.
  
 
  0.543
EDM37727.1
COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
  
 
 
 0.501
EDM33926.1
Hypothetical protein; COG1409 Predicted phosphohydrolases.
  
 
 0.483
EDM36059.1
Putative glycerol diffusion channel; COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.483
mqo
Malate:quinone oxidoreductase; COG0579 Predicted dehydrogenase.
    
 0.469
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.